3NOO Lyase date Jun 25, 2010
title Crystal Structure Of C101a Isocyanide Hydratase From Pseudom Fluorescens
authors M.Lakshminarasimhan, P.Madzelan, R.Nan, N.M.Milkovic, M.A.Wilson
compound source
Molecule: Thijpfpi Family Protein
Chain: A, B
Ec: 4.2.1.103
Engineered: Yes
Mutation: Yes
Organism_scientific: Pseudomonas Fluorescens
Organism_taxid: 294
Gene: Pfl_4109
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.658 40.391 83.832 90.00 104.52 90.00
method X-Ray Diffractionresolution 1.03 Å
ligand ACT, EDO enzyme Lyase E.C.4.2.1.103 BRENDA
Gene PFL
Primary referenceEvolution of new enzymatic function by structural modulation of cysteine reactivity in Pseudomonas fluorescens isocyanide hydratase., Lakshminarasimhan M, Madzelan P, Nan R, Milkovic NM, Wilson MA, J Biol Chem. 2010 Sep 17;285(38):29651-61. Epub 2010 Jul 14. PMID:20630867
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (168 Kb) [Save to disk]
  • Biological Unit Coordinates (3noo.pdb1.gz) 164 Kb
  • LPC: Ligand-Protein Contacts for 3NOO
  • CSU: Contacts of Structural Units for 3NOO
  • Structure Factors (1496 Kb)
  • Retrieve 3NOO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NOO from S2C, [Save to disk]
  • Re-refined 3noo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NOO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NOO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NOO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3noo_B] [3noo] [3noo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3NOO
  • Community annotation for 3NOO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science