3NYX	Transferase Transferase Inhibitor	date	Jul 15, 2010
title	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazol Thiophene Inhibitor
authors	C.Eigenbrot, M.Ultsch
compound		source
Molecule: Non-Receptor Tyrosine-Protein Kinase Tyk2 Chain: A Fragment: Kinase Domain Jh1 Ec: 2.7.10.2 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tyk2 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_strain: Sf9
symmetry	Space Group: P 21 21 21	R_factor 0.215 R_Free 0.275
crystal cell	length a length b length c angle alpha angle beta angle gamma 55.318 70.436 86.488 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	DTT, TZ1	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	A new regulatory switch in a JAK protein kinase., Tsui V, Gibbons P, Ultsch M, Mortara K, Chang C, Blair W, Pulk R, Stanley M, Starovasnik M, Williams D, Lamers M, Leonard P, Magnuson S, Liang J, Eigenbrot C, Proteins. 2010 Oct 7. PMID:21117080

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk] Biological Unit Coordinates (3nyx.pdb1.gz) 97 Kb LPC: Ligand-Protein Contacts for 3NYX CSU: Contacts of Structural Units for 3NYX Structure Factors (160 Kb) Retrieve 3NYX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NYX from S2C, [Save to disk] Re-refined 3nyx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NYX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NYX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3NYX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nyx_A] [3nyx] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3NYX: [TyrKc ] by SMART

Other resources with information on 3NYX

Community annotation for 3NYX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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