3O2S Hydrolase date Jul 22, 2010
title Crystal Structure Of The Human Symplekin-Ssu72 Complex
authors L.Tong, K.Xiang
compound source
Molecule: Symplekin
Chain: A
Fragment: N-Terminal Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sympk, Spk
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Rna Polymerase II Subunit A C-Terminal Domain Pho Ssu72;
Chain: B
Synonym: Ctd Phosphatase Ssu72
Ec: 3.1.3.16
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ssu72, Hspc182, Pnas-120
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.211 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.396 113.564 59.102 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand PO4 enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceCrystal structure of the human symplekin-Ssu72-CTD phosphopeptide complex., Xiang K, Nagaike T, Xiang S, Kilic T, Beh MM, Manley JL, Tong L, Nature. 2010 Sep 22. PMID:20861839
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk]
  • Biological Unit Coordinates (3o2s.pdb1.gz) 166 Kb
  • LPC: Ligand-Protein Contacts for 3O2S
  • CSU: Contacts of Structural Units for 3O2S
  • Structure Factors (614 Kb)
  • Retrieve 3O2S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O2S from S2C, [Save to disk]
  • Re-refined 3o2s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3O2S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3O2S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3O2S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o2s_A] [3o2s] [3o2s_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3O2S
  • Community annotation for 3O2S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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