3O37	Transcription Protein Binding	date	Jul 23, 2010
title	Crystal Structure Of Trim24 Phd-Bromo Complexed With H3(1-10 Peptide
authors	Z.Wang, D.J.Patel
compound		source
Molecule: Transcription Intermediary Factor 1-Alpha Chain: A, B, C, D Fragment: Unp Residues 824-1006 Synonym: Tif1-Alpha, Tripartite Motif-Containing Protein 24 Finger Protein 82; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Trim24, Rnf82, Tif1, Tif1a Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsfduet-1
Molecule: Histone H3.1 Chain: E, F, G, H Fragment: Unp Residues 2-11 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: This Sequence Occurs Naturally In Humans
symmetry	Space Group: P 1	R_factor 0.227 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 35.667 63.848 79.299 89.92 89.99 89.80
method	X-Ray Diffraction	resolution	2.00 Å
ligand	ZN	enzyme
Primary reference	TRIM24 links a non-canonical histone signature to breast cancer., Tsai WW, Wang Z, Yiu TT, Akdemir KC, Xia W, Winter S, Tsai CY, Shi X, Schwarzer D, Plunkett W, Aronow B, Gozani O, Fischle W, Hung MC, Patel DJ, Barton MC, Nature. 2010 Dec 16;468(7326):927-32. PMID:21164480

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk] Biological Unit Coordinates (3o37.pdb1.gz) 33 Kb Biological Unit Coordinates (3o37.pdb2.gz) 33 Kb Biological Unit Coordinates (3o37.pdb3.gz) 33 Kb Biological Unit Coordinates (3o37.pdb4.gz) 33 Kb LPC: Ligand-Protein Contacts for 3O37 CSU: Contacts of Structural Units for 3O37 Structure Factors (429 Kb) Retrieve 3O37 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3O37 from S2C, [Save to disk] Re-refined 3o37 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3O37 in 3D

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Visual 3D analysis of 3O37

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3O37, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3o37_D] [3o37_G] [3o37_E] [3o37] [3o37_F] [3o37_A] [3o37_H] [3o37_C] [3o37_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3O37: [BROMO] [PHD ] by SMART

Other resources with information on 3O37

Community annotation for 3O37 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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