3O3C Transferase date Jul 23, 2010
title Glycogen Synthase Basal State Udp Complex
authors S.Baskaran, T.D.Hurley
compound source
Molecule: Glycogen [Starch] Synthase Isoform 2
Chain: A, B, C, D
Ec: 2.4.1.11
Engineered: Yes
Mutation: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast
Organism_taxid: 4932
Gene: Gsy2, Ylr258w, L8479.8
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 1 21 1
R_factor 0.219 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.586 167.209 121.251 90.00 102.66 90.00
method X-Ray Diffractionresolution 3.51 Å
ligand SO4, UDP enzyme Transferase E.C.2.4.1.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural basis for glucose-6-phosphate activation of glycogen synthase., Baskaran S, Roach PJ, Depaoli-Roach AA, Hurley TD, Proc Natl Acad Sci U S A. 2010 Sep 27. PMID:20876143
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (370 Kb) [Save to disk]
  • Biological Unit Coordinates (3o3c.pdb1.gz) 361 Kb
  • LPC: Ligand-Protein Contacts for 3O3C
  • CSU: Contacts of Structural Units for 3O3C
  • Structure Factors (1181 Kb)
  • Retrieve 3O3C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O3C from S2C, [Save to disk]
  • Re-refined 3o3c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3O3C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3O3C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3O3C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o3c_C] [3o3c] [3o3c_B] [3o3c_D] [3o3c_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3O3C
  • Community annotation for 3O3C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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