3O4R	Oxidoreductase	date	Jul 27, 2010
title	Crystal Structure Of Human Dehydrogenasereductase (Sdr Fami (Dhrs4)
authors	E.Ugochukwu, C.Bhatia, T.Krojer, M.Vollmar, W.W.Yue, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, F.Von Delft, U.Oppermann, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Dehydrogenasereductase Sdr Family Member 4 Chain: A, B, C, D Fragment: Dhrs4 Synonym: Short-Chain Dehydrogenasereductase Family Member Dependent Carbonyl Reductasenadp-Retinol Dehydrogenase, Ph Peroxisomal Short-Chain Alcohol Dehydrogenase, Pscd, Nadph- Retinol Dehydrogenasereductase, Nrdr, Humnrdr, Scad-Srl; Ec: 1.1.1.184 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dhrs4, Unq851pro1800 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-R3-Prare2 Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 21 21 21	R_factor 0.210 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.070 132.200 133.796 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	EDO, EPE, GOL, NAP	enzyme	Oxidoreductase E.C.1.1.1.184 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk] Biological Unit Coordinates (3o4r.pdb1.gz) 163 Kb LPC: Ligand-Protein Contacts for 3O4R CSU: Contacts of Structural Units for 3O4R Structure Factors (1736 Kb) Retrieve 3O4R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3O4R from S2C, [Save to disk] Re-refined 3o4r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3O4R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3O4R

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3O4R, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3o4r_B] [3o4r] [3o4r_A] [3o4r_C] [3o4r_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3O4R

Community annotation for 3O4R at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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