3O7O Hydrolase date Jul 30, 2010
title Use Of Synthetic Symmetrization In The Crystallization And S Determination Of Cela From Thermotoga Maritima
authors G.J.Forse, N.Ram, T.O.Yeates
compound source
Molecule: Endoglucanase
Chain: A, B
Engineered: Yes
Mutation: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Gene: Tm1524, Tm_1524
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 63
R_factor 0.176 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.028 114.028 98.818 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.41 Å
ligand BR enzyme
Gene TM
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceUse of synthetic symmetrization in the crystallization and structure determination of CelA from Thermotoga maritima., Forse GJ, Ram N, Banatao DR, Cascio D, Sawaya MR, Klock HE, Lesley SA, Yeates TO, Protein Sci. 2010 Nov 16. PMID:21082721
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (3o7o.pdb1.gz) 89 Kb
  • Biological Unit Coordinates (3o7o.pdb2.gz) 46 Kb
  • Biological Unit Coordinates (3o7o.pdb3.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 3O7O
  • CSU: Contacts of Structural Units for 3O7O
  • Structure Factors (938 Kb)
  • Retrieve 3O7O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O7O from S2C, [Save to disk]
  • Re-refined 3o7o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3O7O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3O7O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3O7O, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o7o] [3o7o_B] [3o7o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3O7O
  • Community annotation for 3O7O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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