3O8H Transcription date Aug 03, 2010
title Ethr From Mycobacterium Tuberculosis In Complex With Compoun
authors N.Willand, M.Desroses, P.Toto, B.Diri, Z.Lens, V.Villeret, P.Ruckt C.Locht, A.Baulard, B.Deprez
compound source
Molecule: Transcriptional Regulatory Repressor Protein (Tet Ethr;
Chain: A
Synonym: Transcriptional Regulator, Tetr Family
Engineered: Yes
 Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Ethr, Mt3970, Rv3855
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.194 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.300 121.300 33.560 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand O8H enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceExploring Drug Target Flexibility Using in Situ Click Chemistry: Application to a Mycobacterial Transcriptional Regulator., Willand N, Desroses M, Toto P, Dirie B, Lens Z, Villeret V, Rucktooa P, Locht C, Baulard A, Deprez B, ACS Chem Biol. 2010 Aug 26. PMID:20704273
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (3o8h.pdb1.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 3O8H
  • CSU: Contacts of Structural Units for 3O8H
  • Structure Factors (293 Kb)
  • Retrieve 3O8H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O8H from S2C, [Save to disk]
  • Re-refined 3o8h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3O8H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3O8H
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3O8H, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o8h] [3o8h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3O8H
  • Community annotation for 3O8H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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