3OE0	Signaling Protein, Hydrolase Antibiotic	date	Aug 12, 2010
title	Crystal Structure Of The Cxcr4 Chemokine Receptor In Complex Cyclic Peptide Antagonist Cvx15
authors	B.Wu, C.D.Mol, G.W.Han, V.Katritch, E.Y.T.Chien, W.Liu, V.Cherezov R.C.Stevens, Accelerated Technologies Center For Gene To 3d (Atcg3d), Gpcr Network (Gpcr)
compound		source
Molecule: C-X-C Chemokine Receptor Type 4, Lysozyme Chimera Chain: A Fragment: Cxcr4 Residues 2-228, Lysozyme Residues 1002-1161 Residues 231-319; Synonym: Cxc-R4, Cxcr-4, Stromal Cell-Derived Factor 1 Rece Receptor, Fusin, Leukocyte-Derived Seven Transmembrane Do Receptor, Lestr, Lcr1, Fb22, Npyrl, Hm89, Lysis Protein, Mu Endolysin; Ec: 3.2.1.17 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens, Enterobacteria Phage T4 Organism_taxid: 9606, 10665 Gene: Cxcr4, Cxcr4_human, E Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_strain: Sf9 Expression_system_vector_type: Bacmid Expression_system_plasmid: Pfastbac
Molecule: Polyphemusin Analog, Cxc Chemokine Receptor Antag Chain: I Engineered: Yes Other_details: Cyclic Peptide Cvx15		Synthetic: Yes Other_details: Synthetic Analog And Derivative Of Polyphemu Limulus Polyphemus (Horseshoe Crab)
symmetry	Space Group: C 1 2 1	R_factor 0.215 R_Free 0.267
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.080 144.860 73.990 90.00 104.54 90.00
method	X-Ray Diffraction	resolution	2.90 Å
ligand	ALN, CIR, DPR	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
Gene	CXCR4 (H. sapiens)
Gene Ontology	Chain Function Process Component A
Disease	Myelokathexis, isolated OMIM:162643 WHIM syndrome OMIM:162643
Primary reference	Structures of the CXCR4 Chemokine GPCR with Small-Molecule and Cyclic Peptide Antagonists., Wu B, Chien EY, Mol CD, Fenalti G, Liu W, Katritch V, Abagyan R, Brooun A, Wells P, Bi FC, Hamel DJ, Kuhn P, Handel TM, Cherezov V, Stevens RC, Science. 2010 Oct 7. PMID:20929726

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk] Biological Unit Coordinates (3oe0.pdb1.gz) 287 Kb LPC: Ligand-Protein Contacts for 3OE0 CSU: Contacts of Structural Units for 3OE0 Structure Factors (280 Kb) Retrieve 3OE0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OE0 from S2C, [Save to disk] Re-refined 3oe0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 3OE0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OE0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3oe0_A] [3oe0_I] [3oe0] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3OE0

Community annotation for 3OE0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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