3OJA	Protein Binding	date	Aug 20, 2010
title	Crystal Structure Of Lrim1apl1c Complex
authors	R.H.G.Baxter, J.Deisenhofer
compound		source
Molecule: Leucine-Rich Immune Molecule 1 Chain: A Fragment: Unp Residues 23-509 Engineered: Yes		Organism_scientific: Anopheles Gambiae Organism_common: African Malaria Mosquito Organism_taxid: 7165 Strain: G3 Gene: Agap006348, Lrim1 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Bac-To-Bac
Molecule: Anopheles Plasmodium-Responsive Leucine-Rich Repe 1; Chain: B Fragment: Unp Residues 140-729 Engineered: Yes		Organism_scientific: Anopheles Gambiae Organism_common: African Malaria Mosquito Organism_taxid: 7165 Strain: G3 Gene: Agap007033, Apl1c Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Bac-To-Bac
symmetry	Space Group: P 21 21 21	R_factor 0.205 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 109.890 110.890 168.330 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	MAN, NAG	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	A heterodimeric complex of the LRR proteins LRIM1 and APL1C regulates complement-like immunity in Anopheles gambiae., Baxter RH, Steinert S, Chelliah Y, Volohonsky G, Levashina EA, Deisenhofer J, Proc Natl Acad Sci U S A. 2010 Sep 8. PMID:20826443

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (188 Kb) [Save to disk] Biological Unit Coordinates (3oja.pdb1.gz) 181 Kb LPC: Ligand-Protein Contacts for 3OJA CSU: Contacts of Structural Units for 3OJA Structure Factors (463 Kb) Retrieve 3OJA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OJA from S2C, [Save to disk] Re-refined 3oja structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OJA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3OJA

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OJA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3oja_A] [3oja] [3oja_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3OJA: [LRR] [LRR_TYP ] by SMART

Other resources with information on 3OJA

Community annotation for 3OJA at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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