3OOM Transferase Transferase Inhibitor date Aug 31, 2010
title Crystal Structure Of The Acvr1 Kinase Domain In Complex With Imidazo[1,2-B]Pyridazine Inhibitor K00507
authors A.Chaikuad, C.Sanvitale, C.Cooper, P.Mahajan, N.Daga, K.Petrie, I. O.Gileadi, O.Fedorov, C.Allerston, T.Krojer, F.Von Delft, J.Weig C.H.Arrowsmith, A.M.Edwards, C.Bountra, A.Bullock, Structural G Consortium (Sgc)
compound source
Molecule: Activin Receptor Type-1
Chain: A
Fragment: Kinase Domain (Unp Residue 201-499)
Synonym: Activin Receptor Type I, Actr-I, Serinethreonine- Kinase Receptor R1, Skr1, Activin Receptor-Like Kinase 2, A B Superfamily Receptor Type I, Tsr-I;
Ec: 2.7.11.30
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Acvr1, Acvrlk2
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfb-Lic-Bse
symmetry Space Group: C 2 2 21
R_factor 0.166 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.400 88.030 138.970 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 507, EDO, PO4 enzyme Transferase E.C.2.7.11.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (3oom.pdb1.gz) 206 Kb
  • LPC: Ligand-Protein Contacts for 3OOM
  • CSU: Contacts of Structural Units for 3OOM
  • Structure Factors (370 Kb)
  • Retrieve 3OOM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OOM from S2C, [Save to disk]
  • Re-refined 3oom structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3OOM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3OOM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OOM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3oom] [3oom_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OOM: [STYKc ] by SMART
  • Other resources with information on 3OOM
  • Community annotation for 3OOM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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