3ORP Transferase date Sep 07, 2010
title Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (C Form 5)
authors M.C.Good, N.Echols, T.N.Lombana, T.Alber, Tb Structural Genomics Consortium (Tbsgc)
compound source
Molecule: Serinethreonine Protein Kinase
Chain: A
Fragment: Kinase Domain (Unp Residues 1 To 308)
Engineered: Yes
Mutation: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 419947
Strain: H37rv
Gene: Mra_0016, Pknb, Pknb (Rv0014c)
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.188 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.185 52.164 155.652 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand AGS enzyme
Gene MRA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (3orp.pdb1.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 3ORP
  • CSU: Contacts of Structural Units for 3ORP
  • Structure Factors (135 Kb)
  • Retrieve 3ORP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ORP from S2C, [Save to disk]
  • Re-refined 3orp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ORP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ORP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ORP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3orp_A] [3orp]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3ORP: [S_TKc ] by SMART
  • Other resources with information on 3ORP
  • Community annotation for 3ORP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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