3OU0	Hydrolase	date	Sep 14, 2010
title	Re-Refined 3cs0
authors	R.T.Sauer, R.A.Grant, S.Kim
compound		source
Molecule: Periplasmic Serine Endoprotease Degp Chain: A Fragment: Degp, Unp Residues 27-474 Synonym: Protease Do, Degp Ec: 3.4.21.- Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: B0161, Degp, Htra, Jw0157, Ptd Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Pentapeptide Chain: B Engineered: Yes		Synthetic: Yes
Molecule: Heptapeptide Chain: C Engineered: Yes		Synthetic: Yes
symmetry	Space Group: F 4 3 2	R_factor 0.196 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 253.929 253.929 253.929 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	MSE	enzyme	Hydrolase E.C.3.4.21 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages., Kim S, Grant RA, Sauer RT, Cell. 2011 Apr 1;145(1):67-78. PMID:21458668

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (3ou0.pdb1.gz) 1360 Kb Biological Unit Coordinates (3ou0.pdb2.gz) 2 Kb Biological Unit Coordinates (3ou0.pdb3.gz) 3 Kb LPC: Ligand-Protein Contacts for 3OU0 CSU: Contacts of Structural Units for 3OU0 Structure Factors (137 Kb) Retrieve 3OU0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OU0 from S2C, [Save to disk] Re-refined 3ou0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OU0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3OU0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OU0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ou0_C] [3ou0] [3ou0_A] [3ou0_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3OU0: [PDZ ] by SMART

Other resources with information on 3OU0

Community annotation for 3OU0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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