3OY0 Lyase Lyase Inhibitor date Sep 22, 2010
title Human Carbonic Anhydrase II Complexed With 1-(4-(4-(2- (Isopropylsulfonyl)Phenylamino)-1h-Pyrrolo[2,3-B]Pyridin-6- 3-Methoxyphenyl)Piperidin-4-Ol
authors M.Aggarwal, R.Mckenna
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonic Anhydrase II, Ca-II, Carbonate Dehydratas Carbonic Anhydrase C, Cac;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3) Plyss
Expression_system_vector_type: Plasmid
symmetry Space Group: P 1 21 1
R_factor 0.156 R_Free 0.192
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.235 41.331 72.028 90.00 104.15 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand DMS, GOL, OY0, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAnticonvulsant 4-aminobenzenesulfonamide derivatives with branched-alkylamide moieties: X-ray crystallography and inhibition studies of human carbonic anhydrase isoforms I, II, VII, and XIV., Hen N, Bialer M, Yagen B, Maresca A, Aggarwal M, Robbins AH, McKenna R, Scozzafava A, Supuran CT, J Med Chem. 2011 Jun 9;54(11):3977-81. Epub 2011 May 9. PMID:21506569
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (3oy0.pdb1.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 3OY0
  • CSU: Contacts of Structural Units for 3OY0
  • Structure Factors (391 Kb)
  • Retrieve 3OY0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OY0 from S2C, [Save to disk]
  • Re-refined 3oy0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3OY0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3OY0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OY0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3oy0] [3oy0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OY0: [Carb_anhydrase ] by SMART
  • Other resources with information on 3OY0
  • Community annotation for 3OY0 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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