3OYW	Carbohydrate Binding Protein	date	Sep 23, 2010
title	Crystal Structure Of Human Galectin-1 In Complex With Thiodigalactoside
authors	H.Blanchard, P.M.Collins
compound		source
Molecule: Galectin-1 Chain: A Synonym: Gal-1, Lectin Galactoside-Binding Soluble 1, Beta- Galactoside-Binding Lectin L-14-I, Lactose-Binding Lectin 1 Lectin 1, Galaptin, 14 Kda Lectin, Hpl, Hbl, Putative Mapk- Protein Pm12, 14 Kda Laminin-Binding Protein, Hlbp14; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Lgals1 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Galectin-1 Chain: B Synonym: Gal-1, Lectin Galactoside-Binding Soluble 1, Beta- Galactoside-Binding Lectin L-14-I, Lactose-Binding Lectin 1 Lectin 1, Galaptin, 14 Kda Lectin, Hpl, Hbl, Putative Mapk- Protein Pm12, 14 Kda Laminin-Binding Protein, Hlbp14; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Lgals1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.167 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 44.368 58.367 111.793 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	CME, CSO, GAL, YIO BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Galectin inhibitory disaccharides promote tumour immunity in a breast cancer model., Stannard KA, Collins PM, Ito K, Sullivan EM, Scott SA, Gabutero E, Darren Grice I, Low P, Nilsson UJ, Leffler H, Blanchard H, Ralph SJ, Cancer Lett. 2010 Dec 28;299(2):95-110. Epub 2010 Sep 9. PMID:20826047

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk] Biological Unit Coordinates (3oyw.pdb1.gz) 46 Kb LPC: Ligand-Protein Contacts for 3OYW CSU: Contacts of Structural Units for 3OYW Structure Factors (155 Kb) Retrieve 3OYW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OYW from S2C, [Save to disk] Re-refined 3oyw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OYW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3OYW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OYW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3oyw_A] [3oyw_B] [3oyw] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3OYW: [GLECT] [Gal-bind_lectin ] by SMART

Other resources with information on 3OYW

Community annotation for 3OYW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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