3OZ0	Transcription Transcription Regulator	date	Sep 24, 2010
title	Ppar Delta In Complex With Azppard02
authors	D.Ogg
compound		source
Molecule: Peroxisome Proliferator-Activated Receptor Delta Chain: A Fragment: Nuclear Receptor Protein, Unp Residues 165-441 Synonym: Ppar-Delta, Nuci, Nuclear Hormone Receptor 1, Nuc1 Receptor Subfamily 1 Group C Member 2, Peroxisome Prolifera Activated Receptor Beta, Ppar-Beta; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ppard, Nr1c2, Pparb Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.215 R_Free 0.270
crystal cell	length a length b length c angle alpha angle beta angle gamma 113.258 49.134 58.574 90.00 105.34 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	3OZ	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of isoindoline and tetrahydroisoquinoline derivatives as potent, selective PPARdelta agonists., Luckhurst CA, Stein LA, Furber M, Webb N, Ratcliffe MJ, Allenby G, Botterell S, Tomlinson W, Martin B, Walding A, Bioorg Med Chem Lett. 2011 Jan 1;21(1):492-6. Epub 2010 Oct 27. PMID:21094606

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (3oz0.pdb1.gz) 43 Kb LPC: Ligand-Protein Contacts for 3OZ0 CSU: Contacts of Structural Units for 3OZ0 Structure Factors (47 Kb) Retrieve 3OZ0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OZ0 from S2C, [Save to disk] Re-refined 3oz0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OZ0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3OZ0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OZ0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3oz0_A] [3oz0] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3OZ0: [HOLI ] by SMART

Other resources with information on 3OZ0

Community annotation for 3OZ0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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