3P3W Transport Protein date Oct 05, 2010
title Structure Of A Dimeric Glua3 N-Terminal Domain (Ntd) At 4.2 Resolution
authors M.Rossmann, M.Sukumaran, I.H.Greger
compound source
Molecule: Glutamate Receptor 3
Chain: A, B, C, D
Fragment: N-Terminal Domain
Synonym: Glur-3, Glur-C, Glur-K3, Glutamate Receptor Ionotr 3, Glua3, Ampa-Selective Glutamate Receptor 3;
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Cell: Hek 293 Cell
Gene: Gria3, Glur3
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.306 R_Free 0.338
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.960 127.920 130.050 90.00 90.00 90.00
method X-Ray Diffractionresolution 4.20 Å
Primary referenceDynamics and allosteric potential of the AMPA receptor N-terminal domain., Sukumaran M, Rossmann M, Shrivastava I, Dutta A, Bahar I, Greger IH, EMBO J. 2011 Mar 2;30(5):972-82. Epub 2011 Feb 11. PMID:21317871
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (506 Kb) [Save to disk]
  • Biological Unit Coordinates (3p3w.pdb1.gz) 247 Kb
  • Biological Unit Coordinates (3p3w.pdb2.gz) 251 Kb
  • CSU: Contacts of Structural Units for 3P3W
  • Structure Factors (228 Kb)
  • Retrieve 3P3W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3P3W from S2C, [Save to disk]
  • Re-refined 3p3w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3P3W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3P3W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3P3W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3p3w_B] [3p3w_D] [3p3w] [3p3w_C] [3p3w_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3P3W
  • Community annotation for 3P3W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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