3P9J Transferase Transferase Inhibitor date Oct 17, 2010
title Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
authors N.A.Kairies, T.Oliveira, R.A.Engh
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A
Fragment: Unp Residues 124-391
Synonym: Aurora Kinase A, Auroraipl1-Related Kinase 1, Ark Aurora-Related Kinase 1, Hark1, Breast Tumor-Amplified Kina Serinethreonine-Protein Kinase 15, Serinethreonine-Protei Aurora-A;
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aik, Ark1, Aura, Aurka, Btak, Stk15, Stk6
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61 2 2
R_factor 0.201 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
83.113 83.113 169.191 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand P9J BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePhthalazinone Pyrazoles as Potent, Selective, and Orally Bioavailable Inhibitors of Aurora-A Kinase., Prime ME, Courtney SM, Brookfield FA, Marston RW, Walker V, Warne J, Boyd AE, Kairies NA, von der Saal W, Limberg A, Georges G, Engh RA, Goller B, Rueger P, Rueth M, J Med Chem. 2010 Dec 3. PMID:21128645
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (3p9j.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 3P9J
  • CSU: Contacts of Structural Units for 3P9J
  • Structure Factors (140 Kb)
  • Retrieve 3P9J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3P9J from S2C, [Save to disk]
  • Re-refined 3p9j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3P9J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3P9J
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3P9J, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3p9j_A] [3p9j]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3P9J: [S_TKc ] by SMART
  • Other resources with information on 3P9J
  • Community annotation for 3P9J at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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