3PNB Transferase date Nov 18, 2010
title Phosphopantetheine Adenylyltransferase From Mycobacterium Tu In Complex With Coenzyme A
authors T.J.Wubben, A.D.Mesecar
compound source
Molecule: Phosphopantetheine Adenylyltransferase
Chain: A, B, C, D
Synonym: Dephospho-Coa Pyrophosphorylase, Pantetheine-Phosp Adenylyltransferase, Ppat;
Ec: 2.7.7.3
Engineered: Yes
 Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Coad, Kdtb, Rv2965c, Mt3043, Mtcy349.22, U0002e
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 3 2 1
R_factor 0.215 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.459 114.459 134.470 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.11 Å
ligand COA enzyme Transferase E.C.2.7.7.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure of Mycobacterium tuberculosis phosphopantetheine adenylyltransferase in complex with the feedback inhibitor CoA reveals only one active-site conformation., Wubben T, Mesecar AD, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 May 1;67(Pt, 5):541-5. Epub 2011 Apr 20. PMID:21543857
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk]
  • Biological Unit Coordinates (3pnb.pdb1.gz) 160 Kb
  • Biological Unit Coordinates (3pnb.pdb2.gz) 161 Kb
  • LPC: Ligand-Protein Contacts for 3PNB
  • CSU: Contacts of Structural Units for 3PNB
  • Structure Factors (457 Kb)
  • Retrieve 3PNB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PNB from S2C, [Save to disk]
  • Re-refined 3pnb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3PNB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3PNB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3PNB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pnb_D] [3pnb_C] [3pnb_A] [3pnb] [3pnb_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3PNB
  • Community annotation for 3PNB at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science