3PRZ Transferase Transferase Inhibitor date Nov 30, 2010
title Quinazolines With Intra-Molecular Hydrogen Bonding Scaffold Pi3kmtor Dual Inhibitors.
authors D.R.Knighton, S.E.Greasley, C.M.L.Rodgers
compound source
Molecule: Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Ca Subunit Gamma Isoform;
Chain: A
Fragment: Unp Residues 144-1102
Synonym: Ptdins-3-Kinase Subunit Gamma, Pi3-Kinase Subunit Pi3k-Gamma, Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Catalytic Subunit Gamma, Ptdins-3-Kinase Subunit P110-Gamma Pi3k;
Ec: 2.7.1.153
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pik3cg
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: C 1 2 1
R_factor 0.250 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
143.871 67.188 106.437 90.00 95.65 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand 3RZ enzyme Transferase E.C.2.7.1.153 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceQuinazolines with intra-molecular hydrogen bonding scaffold (iMHBS) as PI3K/mTOR dual inhibitors., Liu KK, Huang X, Bagrodia S, Chen JH, Greasley S, Cheng H, Sun S, Knighton D, Rodgers C, Rafidi K, Zou A, Xiao J, Yan S, Bioorg Med Chem Lett. 2011 Feb 15;21(4):1270-4. Epub 2010 Dec 10. PMID:21269826
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (3prz.pdb1.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 3PRZ
  • CSU: Contacts of Structural Units for 3PRZ
  • Structure Factors (648 Kb)
  • Retrieve 3PRZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PRZ from S2C, [Save to disk]
  • Re-refined 3prz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3PRZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3PRZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3PRZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3prz] [3prz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3PRZ: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART
  • Other resources with information on 3PRZ
  • Community annotation for 3PRZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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