3Q5U Protein Transport Membrane Protein date Dec 29, 2010
title A Minimal Nls From Human Scramblase 4 Complexed With Importi
authors A.Bhardwaj, G.Cingolani
compound source
Molecule: Importin Subunit Alpha-2
Chain: A
Fragment: Unp Residues 70-529
Synonym: Importin Alpha P1, Karyopherin Subunit Alpha-2, Pe Pore Targeting Complex 58 Kda Subunit, Ptac58, Rag Cohort P Srp1-Alpha;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Kpna2, Rch1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-30a

Molecule: Phospholipid Scramblase 4
Chain: B
Fragment: Unp Residues 271-283
Synonym: Pl Scramblase 4, Ca(2+)-Dependent Phospholipid Scr Cell Growth-Inhibiting Gene 43 Protein, Tra1;
Engineered: Yes

Synthetic: Yes
Other_details: Human Plscr4-Nls Was Synthesized By Solid-Ph Methods And Purified By Reverse-Phase Hplc (M.W. 1483.78 Da
symmetry Space Group: P 21 21 21
R_factor 0.187 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.451 90.973 96.895 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA minimal NLS in human phospholipid scramblase 4 that binds only the minor NLS-binding site of importin {alpha}1., Lott K, Bhardwaj A, Sims PJ, Cingolani G, J Biol Chem. 2011 Jun 20. PMID:21690087
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (3q5u.pdb1.gz) 135 Kb
  • CSU: Contacts of Structural Units for 3Q5U
  • Structure Factors (183 Kb)
  • Retrieve 3Q5U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q5U from S2C, [Save to disk]
  • Re-refined 3q5u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3Q5U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3Q5U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3Q5U, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q5u_A] [3q5u_B] [3q5u]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3Q5U: [ARM ] by SMART
  • Other resources with information on 3Q5U
  • Community annotation for 3Q5U at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science