3Q7P	Signaling Protein	date	Jan 05, 2011
title	Crystal Structure Of Rad G-Domain-Gtp Analog Complex
authors	Y.Sasson, L.Navon-Perry, J.A.Hirsch
compound		source
Molecule: Gtp-Binding Protein Rad Chain: A, B Fragment: G-Domain, Residues 90-255 Synonym: Rad1, Ras Associated With Diabetes Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rrad, Rad Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet21d
symmetry	Space Group: P 31	R_factor 0.212 R_Free 0.263
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.628 38.628 153.456 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	GNP, MG	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	RGK Family G-Domain:GTP Analog Complex Structures and Nucleotide-Binding Properties., Sasson Y, Navon-Perry L, Huppert D, Hirsch JA, J Mol Biol. 2011 Aug 29. PMID:21903096

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (3q7p.pdb1.gz) 24 Kb Biological Unit Coordinates (3q7p.pdb2.gz) 25 Kb LPC: Ligand-Protein Contacts for 3Q7P CSU: Contacts of Structural Units for 3Q7P Structure Factors (59 Kb) Retrieve 3Q7P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3Q7P from S2C, [Save to disk] Re-refined 3q7p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3Q7P in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3Q7P

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3Q7P, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3q7p_B] [3q7p] [3q7p_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3Q7P: [small_GTPase ] by SMART

Other resources with information on 3Q7P

Community annotation for 3Q7P at PDBWiki (http://pdbwiki.org)

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