3Q8J Toxin date Jan 06, 2011
title Crystal Structure Of Asteropsin A From Marine Sponge Asterop
authors J.J.Bowling, F.R.Fronczek, M.T.Hamann, H.Li, J.H.Jung
compound source
Molecule: Asteropsin A
Chain: A
Synonym: Abu8-1
 Organism_scientific: Asteropus
Organism_taxid: 350938
Other_details: Whole Extract
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
14.803 18.557 24.178 83.19 84.10 68.04
method X-Ray Diffractionresolution 0.87 Å
ligand MOH, PCA enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (3q8j.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 3Q8J
  • CSU: Contacts of Structural Units for 3Q8J
  • Structure Factors (363 Kb)
  • Retrieve 3Q8J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q8J from S2C, [Save to disk]
  • Re-refined 3q8j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3Q8J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3Q8J
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3Q8J, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q8j_A] [3q8j]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3Q8J
  • Community annotation for 3Q8J at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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