3QOX	Transferase	date	Feb 11, 2011
title	Dot1l Structure In Complex With Sah
authors	L.Jin
compound		source
Molecule: Histone-Lysine N-Methyltransferase Chain: A Fragment: Unp Residues 1-416 Synonym: Dot1-Like Protein, Histone H3-K79 Methyltransferas Hmtase, Lysine N-Methyltransferase 4; Ec: 2.1.1.43 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dot1l, Kiaa1814, Kmt4 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 65	R_factor 0.219 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 152.710 152.710 51.310 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	SAH, SO4 BindingDB	enzyme	Transferase E.C.2.1.1.43 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Chemogenetic Analysis of Human Protein Methyltransferases., Richon VM, Johnston D, Sneeringer CJ, Jin L, Majer CR, Elliston K, Fred Jerva L, Scott MP, Copeland RA, Chem Biol Drug Des. 2011 May 12. doi: 10.1111/j.1747-0285.2011.01135.x. PMID:21564555

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (3qox.pdb1.gz) 56 Kb LPC: Ligand-Protein Contacts for 3QOX CSU: Contacts of Structural Units for 3QOX Structure Factors (454 Kb) Retrieve 3QOX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QOX from S2C, [Save to disk] Re-refined 3qox structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3QOX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3QOX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3QOX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qox_A] [3qox] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3QOX

Community annotation for 3QOX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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