3QR3 Hydrolase date Feb 16, 2011
title Crystal Structure Of Cel5a (Eg2) From Hypocrea Jecorina (Tri Reesei)
authors T.M.Lee, M.F.Farrow, J.T.Kaiser, F.H.Arnold, S.L.Mayo
compound source
Molecule: Endoglucanase Eg-II
Chain: A, B
Fragment: Catalytic Domain
Synonym: Eglii, Cellulase, Endo-1,4-Beta-Glucanase
Ec: 3.2.1.4
Engineered: Yes
Organism_scientific: Hypocrea Jecorina
Organism_common: Hypocrea Jecorina
Organism_taxid: 51453
Gene: Cel5a, Egl2
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 21 21 21
R_factor 0.163 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.953 84.593 90.113 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand MG, SO4 enzyme Hydrolase E.C.3.2.1.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA structural study of Hypocrea jecorina Cel5A., Lee TM, Farrow MF, Arnold FH, Mayo SL, Protein Sci. 2011 Nov;20(11):1935-40. doi: 10.1002/pro.730. Epub 2011 Sep, 27. PMID:21898652
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (3qr3.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (3qr3.pdb2.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 3QR3
  • CSU: Contacts of Structural Units for 3QR3
  • Structure Factors (308 Kb)
  • Retrieve 3QR3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3QR3 from S2C, [Save to disk]
  • Re-refined 3qr3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3QR3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3QR3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3QR3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3qr3] [3qr3_A] [3qr3_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3QR3
  • Community annotation for 3QR3 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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