3QYU	Isomerase	date	Mar 04, 2011
title	Crystal Structure Of Human Cyclophilin D At 1.54 A Resolutio Temperature
authors	L.Colliandre, M.Gelin, G.Labesse, J.F.Guichou
compound		source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase F Chain: A Fragment: Catalytic Domain Synonym: Ppiase F, Cyclophilin F, Rotamase F Ec: 5.2.1.8 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ppif, Cyp3 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 41 21 2	R_factor 0.148 R_Free 0.189
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.927 57.927 88.537 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.54 Å
ligand		enzyme	Isomerase E.C.5.2.1.8 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	In-plate protein crystallization, in situ ligand soaking and X-ray diffraction., le Maire A, Gelin M, Pochet S, Hoh F, Pirocchi M, Guichou JF, Ferrer JL, Labesse G, Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):747-55. doi:, 10.1107/S0907444911023249. Epub 2011 Aug 9. PMID:21904027

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (3qyu.pdb1.gz) 54 Kb CSU: Contacts of Structural Units for 3QYU Structure Factors (906 Kb) Retrieve 3QYU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QYU from S2C, [Save to disk] Re-refined 3qyu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 3QYU

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3QYU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qyu_A] [3qyu] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3QYU

Community annotation for 3QYU at PDBWiki (http://pdbwiki.org)

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