3QZS	Transcription Nuclear Protein	date	Mar 07, 2011
title	Crystal Structure Of Bptf Bromo In Complex With Histone H4k1 I
authors	H.Li, A.J.Ruthenburg, D.J.Patel
compound		source
Molecule: Nucleosome-Remodeling Factor Subunit Bptf Chain: A, B Synonym: Bromodomain And Phd Finger-Containing Transcriptio Fetal Alz-50 Clone 1 Protein, Fetal Alzheimer Antigen; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bptf, Fac1, Falz Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Rosseta2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex6p
Molecule: Histone H4 Chain: C, D Engineered: Yes		Synthetic: Yes Organism_scientific: Xenopus Laevis Organism_common: Clawed Frog,Common Platanna,Platanna Organism_taxid: 8355 Other_details: Human Histone H4 12-21
symmetry	Space Group: P 1 21 1	R_factor 0.173 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.739 27.197 84.198 90.00 89.87 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	ALY	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Recognition of a Mononucleosomal Histone Modification Pattern by BPTF via Multivalent Interactions., Ruthenburg AJ, Li H, Milne TA, Dewell S, McGinty RK, Yuen M, Ueberheide B, Dou Y, Muir TW, Patel DJ, Allis CD, Cell. 2011 May 27;145(5):692-706. Epub 2011 May 19. PMID:21596426

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk] Biological Unit Coordinates (3qzs.pdb1.gz) 43 Kb Biological Unit Coordinates (3qzs.pdb2.gz) 41 Kb LPC: Ligand-Protein Contacts for 3QZS CSU: Contacts of Structural Units for 3QZS Structure Factors (281 Kb) Retrieve 3QZS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QZS from S2C, [Save to disk] Re-refined 3qzs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3QZS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3QZS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3QZS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qzs_B] [3qzs] [3qzs_C] [3qzs_D] [3qzs_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3QZS: [BROMO ] by SMART

Other resources with information on 3QZS

Community annotation for 3QZS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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