3R21 Transferase Transferase Inhibitor date Mar 11, 2011
title Design, Synthesis, And Biological Evaluation Of Pyrazolopyri Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibi I)
authors L.Zhang, J.Fan, J.H.Chong, A.Cesena, B.Tam, C.Gilson, C.Boykin, D. D.Marcotte, J.Y.Le Brazidec, D.Aivazian, J.Piao, K.Lundgren, K. K.Vu, K.Nguyen
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A
Fragment: Unp Residues 126-391
Synonym: Aurora Kinase A, Auroraipl1-Related Kinase 1, Ark Aurora-Related Kinase 1, Hark1, Breast Tumor-Amplified Kina Serinethreonine-Protein Kinase 15, Serinethreonine-Protei Aurora-A;
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aik, Ark1, Aura, Aurka, Btak, Stk15, Stk6
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest20
symmetry Space Group: P 61 2 2
R_factor 0.258 R_Free 0.305
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.210 82.210 165.700 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
ligand D36, MG BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDesign, synthesis, and biological evaluation of pyrazolopyrimidine-sulfonamides as potent multiple-mitotic kinase (MMK) inhibitors (part I)., Zhang L, Fan J, Chong JH, Cesena A, Tam BY, Gilson C, Boykin C, Wang D, Aivazian D, Marcotte D, Xiao G, Le Brazidec JY, Piao J, Lundgren K, Hong K, Vu K, Nguyen K, Gan LS, Silvian L, Ling L, Teng M, Reff M, Takeda N, Timple N, Wang Q, Morena R, Khan S, Zhao S, Li T, Lee WC, Taveras AG, Chao J, Bioorg Med Chem Lett. 2011 Jul 13. PMID:21798738
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3r21.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 3R21
  • CSU: Contacts of Structural Units for 3R21
  • Structure Factors (116 Kb)
  • Retrieve 3R21 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3R21 from S2C, [Save to disk]
  • Re-refined 3r21 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3R21 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3R21
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3R21, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3r21_A] [3r21]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3R21: [S_TKc ] by SMART
  • Other resources with information on 3R21
  • Community annotation for 3R21 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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