3R6V	Lyase	date	Mar 22, 2011
title	Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1 With Aspartate
authors	G.Fibriansah, V.Puthan Veetil, G.J.Poelarends, A.M.W.H.Thunnis
compound		source
Molecule: Aspartase Chain: A, B, C, D, E, F, G, H Ec: 4.3.1.1 Engineered: Yes		Organism_scientific: Bacillus Sp. Organism_taxid: 96471 Strain: Ym55-1 Gene: Aspb Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Top10 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pbadmyc-His A
symmetry	Space Group: P 1	R_factor 0.193 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 75.853 118.960 141.414 89.93 89.93 76.42
method	X-Ray Diffraction	resolution	2.60 Å
ligand	ASP, CA	enzyme	Lyase E.C.4.3.1.1 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G
Primary reference	Structural basis for the catalytic mechanism of aspartate ammonia lyase., Fibriansah G, Veetil VP, Poelarends GJ, Thunnissen AM, Biochemistry. 2011 Jul 12;50(27):6053-62. Epub 2011 Jun 20. PMID:21661762

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1113 Kb) [Save to disk] Biological Unit Coordinates (3r6v.pdb1.gz) 554 Kb Biological Unit Coordinates (3r6v.pdb2.gz) 558 Kb LPC: Ligand-Protein Contacts for 3R6V CSU: Contacts of Structural Units for 3R6V Structure Factors (2313 Kb) Retrieve 3R6V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3R6V from S2C, [Save to disk] Re-refined 3r6v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3R6V in 3D

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Visual 3D analysis of 3R6V

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3R6V, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3r6v_A] [3r6v_H] [3r6v_C] [3r6v_G] [3r6v_B] [3r6v] [3r6v_D] [3r6v_E] [3r6v_F] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3R6V

Community annotation for 3R6V at PDBWiki (http://pdbwiki.org)

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