3R8V	Transferase Transferase Inhibitor	date	Mar 24, 2011
title	Cdk2 In Complex With Inhibitor Rc-1-135
authors	S.Betzi, R.Alam, H.Han, A.Becker, E.Schonbrunn
compound		source
Molecule: Cyclin-Dependent Kinase 2 Chain: A Synonym: Cdk2, Cell Division Protein Kinase 2, P33 Protein Ec: 2.7.11.22 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cdk2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Tuner(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex6p-1
symmetry	Space Group: P 21 21 21	R_factor 0.192 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.280 71.870 72.280 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	Z62	enzyme	Transferase E.C.2.7.11.22 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Development of Highly Potent and Selective Diaminothiazole Inhibitors of Cyclin-Dependent Kinases., Schonbrunn E, Betzi S, Alam R, Martin MP, Becker A, Han H, Francis R, Chakrasali R, Jakkaraj S, Kazi A, Sebti SM, Cubitt CL, Gebhard AW, Hazlehurst LA, Tash JS, Georg GI, J Med Chem. 2013 May 6. PMID:23600925

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (3r8v.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 3R8V CSU: Contacts of Structural Units for 3R8V Structure Factors (280 Kb) Retrieve 3R8V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3R8V from S2C, [Save to disk] Re-refined 3r8v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3R8V in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3R8V

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3R8V, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3r8v] [3r8v_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3R8V: [S_TKc ] by SMART

Other resources with information on 3R8V

Community annotation for 3R8V at PDBWiki (http://pdbwiki.org)

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