3RAW Transferase date Mar 28, 2011
title Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In Comp Leucettine L41
authors P.Filippakopoulos, O.Fedorov, O.King, M.Debdab, F.Carreaux, S.Ren A.Bullock, J.R.C.Muniz, F.Von Delft, C.H.Arrowsmith, A.M.Edward J.Weigelt, C.Bountra, L.Meijer, J.P.Bazureau, S.Knapp, Structura Genomics Consortium (Sgc)
compound source
Molecule: Dual Specificity Protein Kinase Clk3
Chain: A, B
Fragment: Residues 275-632
Synonym: Cdc-Like Kinase 3
Ec: 2.7.12.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Clk3
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)-R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 1 21 1
R_factor 0.181 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.670 122.420 69.280 90.00 92.60 90.00
method X-Ray Diffractionresolution 2.09 Å
ligand 3RA enzyme Transferase E.C.2.7.12.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (244 Kb) [Save to disk]
  • Biological Unit Coordinates (3raw.pdb1.gz) 121 Kb
  • Biological Unit Coordinates (3raw.pdb2.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 3RAW
  • CSU: Contacts of Structural Units for 3RAW
  • Structure Factors (895 Kb)
  • Retrieve 3RAW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RAW from S2C, [Save to disk]
  • Re-refined 3raw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RAW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3RAW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RAW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3raw_A] [3raw] [3raw_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3RAW: [S_TKc ] by SMART
  • Other resources with information on 3RAW
  • Community annotation for 3RAW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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