3RBU	Hydrolase Hydrolase Inhibitor	date	Mar 30, 2011
title	N-Terminally Avitev-Tagged Human Glutamate Carboxypeptidase Complex With 2-Pmpa
authors	J.Tykvart, P.Sacha, C.Barinka, J.Starkova, T.Knedlik, J.Lubkowski J.Konvalinka
compound		source
Molecule: Glutamate Carboxypeptidase 2 Chain: A Fragment: Unp Residues 44-750 Synonym: Cell Growth-Inhibiting Gene 27 Protein, Folate Hyd Folylpoly-Gamma-Glutamate Carboxypeptidase, Fgcp, Gcpii, Me Glutamate Carboxypeptidase, Mgcp, N-Acetylated-Alpha-Linked Dipeptidase I, Naaladase I, Prostate-Specific Membrane Anti Psma, Pteroylpoly-Gamma-Glutamate Carboxypeptidase; Ec: 3.4.17.21 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Folh, Folh1, Gig27, Naalad1, Psm, Psma Expression_system: Drosophila Melanogaster Expression_system_common: Fruit Fly Expression_system_taxid: 7227 Expression_system_cell_line: Schneider 2 (S2)
symmetry	Space Group: I 2 2 2	R_factor 0.157 R_Free 0.182
crystal cell	length a length b length c angle alpha angle beta angle gamma 101.247 130.559 158.897 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	BMA, CA, CL, G88, MAN, NAG, ZN BindingDB	enzyme	Hydrolase E.C.3.4.17.21 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Efficient and versatile one-step affinity purification of in vivo biotinylated proteins: Expression, characterization and structure analysis of recombinant human glutamate carboxypeptidase II., Tykvart J, Sacha P, Barinka C, Knedlik T, Starkova J, Lubkowski J, Konvalinka J, Protein Expr Purif. 2011 Dec 8. PMID:22178733

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (279 Kb) [Save to disk] Biological Unit Coordinates (3rbu.pdb1.gz) 541 Kb LPC: Ligand-Protein Contacts for 3RBU CSU: Contacts of Structural Units for 3RBU Structure Factors (2117 Kb) Retrieve 3RBU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RBU from S2C, [Save to disk] Re-refined 3rbu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3RBU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3RBU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RBU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rbu] [3rbu_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3RBU

Community annotation for 3RBU at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---