3RDE	Oxidoreductase Oxidoreductase Inhibitor	date	Apr 01, 2011
title	Crystal Structure Of The Catalytic Domain Of Porcine Leukocy Lipoxygenase
authors	M.O.Funk, S.Xu, L.J.Marnett, T.C.Mueser
compound		source
Molecule: Arachidonate 12-Lipoxygenase, 12s-Type Chain: A, B, C, D Fragment: Unp Residues 112-663 Synonym: 12s-Lox, 12s-Lipoxygenase Ec: 1.13.11.31 Engineered: Yes Mutation: Yes		Organism_scientific: Sus Scrofa Organism_common: Pigs,Swine,Wild Boar Organism_taxid: 9823 Gene: Alox12 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta 2 Cell (De3) Expression_system_vector_type: Pet-20b-Hlcds Expression_system_plasmid: Pet-20b
symmetry	Space Group: P 1 21 1	R_factor 0.172 R_Free 0.214
crystal cell	length a length b length c angle alpha angle beta angle gamma 83.450 181.540 91.610 90.00 92.86 90.00
method	X-Ray Diffraction	resolution	1.89 Å
ligand	FE2, K, OYP	enzyme	Oxidoreductase E.C.1.13.11.31 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Crystal Structure of 12-Lipoxygenase Catalytic-Domain-Inhibitor Complex Identifies a Substrate-Binding Channel for Catalysis., Xu S, Mueser TC, Marnett LJ, Funk MO Jr, Structure. 2012 Jul 11. PMID:22795085

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (379 Kb) [Save to disk] Biological Unit Coordinates (3rde.pdb1.gz) 97 Kb Biological Unit Coordinates (3rde.pdb2.gz) 98 Kb Biological Unit Coordinates (3rde.pdb3.gz) 94 Kb Biological Unit Coordinates (3rde.pdb4.gz) 97 Kb Biological Unit Coordinates (3rde.pdb5.gz) 372 Kb LPC: Ligand-Protein Contacts for 3RDE CSU: Contacts of Structural Units for 3RDE Structure Factors (3350 Kb) Retrieve 3RDE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RDE from S2C, [Save to disk] Re-refined 3rde structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 3RDE

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RDE, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rde] [3rde_B] [3rde_A] [3rde_D] [3rde_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 3RDE at PDBWiki (http://pdbwiki.org)

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