3ROC	Transferase Transferase Inhibitor	date	Apr 25, 2011
title	Crystal Structure Of Human P38 Alpha Complexed With A Pyrimi Compound
authors	H.S.Shieh, L.Xing
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Map Kinase 14, Mapk 14, Cytokine Suppressive Anti- Inflammatory Drug-Binding Protein, Csaid-Binding Protein, C Kinase Mxi2, Max-Interacting Protein 2, Mitogen-Activated P Kinase P38 Alpha, Map Kinase P38 Alpha, Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Csbp, Csbp1, Csbp2, Cspb1, Mapk14, Mxi2, Thp-1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgx4t-1
symmetry	Space Group: P 21 21 21	R_factor 0.239 R_Free 0.276
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.311 74.609 77.752 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	29A, 29B BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Substituted N-aryl-6-pyrimidinones: A new class of potent, selective, and orally active p38 MAP kinase inhibitors., Devadas B, Selness SR, Xing L, Madsen HM, Marrufo LD, Shieh H, Messing DM, Yang JZ, Morgan HM, Anderson GD, Webb EG, Zhang J, Devraj RV, Monahan JB, Bioorg Med Chem Lett. 2011 Jul 1;21(13):3856-60. Epub 2011 May 8. PMID:21620699

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (3roc.pdb1.gz) 61 Kb LPC: Ligand-Protein Contacts for 3ROC CSU: Contacts of Structural Units for 3ROC Structure Factors (311 Kb) Retrieve 3ROC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ROC from S2C, [Save to disk] Re-refined 3roc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ROC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ROC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ROC, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3roc] [3roc_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3ROC: [S_TKc ] by SMART

Other resources with information on 3ROC

Community annotation for 3ROC at PDBWiki (http://pdbwiki.org)

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