3S3I	Transferase Transferase Inhibitor	date	May 18, 2011
title	P38 Kinase Crystal Structure In Complex With Small Molecule
authors	V.Segarra, J.Aiguade, R.Roca, M.Fisher, M.Lamers
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Map Kinase 14, Mapk 14, Cytokine Suppressive Anti- Inflammatory Drug-Binding Protein, Csaid-Binding Protein, C Kinase Mxi2, Max-Interacting Protein 2, Mitogen-Activated P Kinase P38 Alpha, Map Kinase P38 Alpha, Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Csbp, Csbp1, Csbp2, Cspb1, Mapk14, Mxi2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh10b-R Expression_system_vector_type: Plasmid Expression_system_plasmid: Sareum Proprietary Pt7-Nh2 Vecto
symmetry	Space Group: P 21 21 21	R_factor 0.229 R_Free 0.258
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.280 84.960 123.510 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	CQ0	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Novel triazolopyridylbenzamides as potent and selective p38alpha inhibitors., Aiguade J, Balague C, Carranco I, Caturla F, Dominguez M, Eastwood P, Esteve C, Gonzalez J, Lumeras W, Orellana A, Preciado S, Roca R, Vidal L, Vidal B, Bioorg Med Chem Lett. 2012 May 15;22(10):3431-6. doi: 10.1016/j.bmcl.2012.03.099., Epub 2012 Apr 4. PMID:22521646

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (3s3i.pdb1.gz) 61 Kb LPC: Ligand-Protein Contacts for 3S3I CSU: Contacts of Structural Units for 3S3I Structure Factors (619 Kb) Retrieve 3S3I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3S3I from S2C, [Save to disk] Re-refined 3s3i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3S3I in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3S3I

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3S3I, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3s3i] [3s3i_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3S3I: [S_TKc ] by SMART

Other resources with information on 3S3I

Community annotation for 3S3I at PDBWiki (http://pdbwiki.org)

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