3S40	Transferase	date	May 18, 2011
title	The Crystal Structure Of A Diacylglycerol Kinases From Bacil Anthracis Str. Sterne
authors	K.Tan, R.Zhang, X.Xu, H.Cui, S.Peterson, A.Savchenko, W.F.Anderson A.Joachimiak, Center For Structural Genomics Of Infectious D (Csgid)
compound		source
Molecule: Diacylglycerol Kinase Chain: A, B, C, D Engineered: Yes		Organism_scientific: Bacillus Anthracis Organism_common: Anthrax,Anthrax Bacterium Organism_taxid: 260799 Strain: Sterne Gene: Bas4713, Ba_5075, Gbaa_5075 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: P15tv Lic
symmetry	Space Group: P 1 21 1	R_factor 0.175 R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.608 130.758 72.794 90.00 115.04 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	MSE	enzyme
note	3S40 is a representative structure
Genes	BA, GBAA
Gene Ontology	Chain Function Process Component A, D, C, B NAD+ kinase activity kinase activity

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (365 Kb) [Save to disk] Biological Unit Coordinates (3s40.pdb1.gz) 91 Kb Biological Unit Coordinates (3s40.pdb2.gz) 96 Kb Biological Unit Coordinates (3s40.pdb3.gz) 95 Kb Biological Unit Coordinates (3s40.pdb4.gz) 88 Kb Biological Unit Coordinates (3s40.pdb5.gz) 359 Kb LPC: Ligand-Protein Contacts for 3S40 CSU: Contacts of Structural Units for 3S40 Structure Factors (2730 Kb) Retrieve 3S40 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3S40 from S2C, [Save to disk] Re-refined 3s40 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3S40 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3S40

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3S40, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3s40] [3s40_A] [3s40_C] [3s40_B] [3s40_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3S40: [DAGKc ] by SMART

Other resources with information on 3S40

Community annotation for 3S40 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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