3S5Z	Hydrolase	date	May 23, 2011
title	Pharmacological Chaperoning In Human Alpha-Galactosidase
authors	A.I.Guce, N.E.Clark, S.C.Garman
compound		source
Molecule: Alpha-Galactosidase A Chain: A, B Synonym: Alpha-D-Galactosidase A, Alpha-D-Galactoside Galactohydrolase, Melibiase; Ec: 3.2.1.22 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gla Expression_system: Nicotiana Benthamiana Expression_system_taxid: 4100 Expression_system_vector_type: Tobacco Mosaic Virus
symmetry	Space Group: C 2 2 21	R_factor 0.210 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.313 140.606 182.486 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	BMA, FUC, GAL, GLA, GOL, MAN, NAG, XYP	enzyme	Hydrolase E.C.3.2.1.22 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	The Molecular Basis of Pharmacological Chaperoning in Human alpha-Galactosidase., Guce AI, Clark NE, Rogich JJ, Garman SC, Chem Biol. 2011 Dec 23;18(12):1521-6. PMID:22195554

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk] Biological Unit Coordinates (3s5z.pdb1.gz) 272 Kb LPC: Ligand-Protein Contacts for 3S5Z CSU: Contacts of Structural Units for 3S5Z Structure Factors (613 Kb) Retrieve 3S5Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3S5Z from S2C, [Save to disk] Re-refined 3s5z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3S5Z in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3S5Z

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3S5Z, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3s5z_B] [3s5z] [3s5z_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3S5Z

Community annotation for 3S5Z at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---