3S72 Lyase date May 26, 2011
title The Origin Of The Hydrophobic Effect In The Molecular Recogn Arylsulfonamides By Carbonic Anhydrase
authors P.W.Snyder, A.Heroux, G.W.Whitesides
compound source
Molecule: Carbonic Anhydrase 2
Chain: B
Synonym: Carbonate Dehydratase II, Carbonic Anhydrase C, Ca Carbonic Anhydrase II, Ca-II;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 1 21 1
R_factor 0.159 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.130 41.449 72.524 90.00 104.53 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand DMS, EVE, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceMechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase., Snyder PW, Mecinovic J, Moustakas DT, Thomas SW 3rd, Harder M, Mack ET, Lockett MR, Heroux A, Sherman W, Whitesides GM, Proc Natl Acad Sci U S A. 2011 Nov 1;108(44):17889-94. Epub 2011 Oct 19. PMID:22011572
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (3s72.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 3S72
  • CSU: Contacts of Structural Units for 3S72
  • Structure Factors (424 Kb)
  • Retrieve 3S72 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S72 from S2C, [Save to disk]
  • Re-refined 3s72 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3S72 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3S72
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3S72, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s72] [3s72_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3S72: [Carb_anhydrase ] by SMART
  • Other resources with information on 3S72
  • Community annotation for 3S72 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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