3SAU	Hydrolase Dna	date	Jun 03, 2011
title	Mutm Interrogation Complex 6
authors	M.C.Spong, Y.Qi, G.L.Verdine
compound		source
Molecule: Dna Glycosylase Chain: A Ec: 4.2.99.18 Engineered: Yes Mutation: Yes		Organism_scientific: Geobacillus Stearothermophilus Organism_common: Bacillus Stearothermophilus Organism_taxid: 1422 Gene: Mutm Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet24b
Molecule: 5'-D(Agpgptpapgpapcpcpapgpgpapcpgp Chain: B Engineered: Yes		Synthetic: Yes Other_details: Synthetic Dna
Molecule: 5'-D(Tpgpcpgptcpcptpgpgp(Tx2) Pcptp 3'; Chain: C Engineered: Yes		Synthetic: Yes Other_details: Synthetic Dna
symmetry	Space Group: P 21 21 21	R_factor 0.188 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.423 93.436 104.920 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.65 Å
ligand	TX2, ZN	enzyme	Lyase E.C.4.2.99.18 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Strandwise translocation of a DNA glycosylase on undamaged DNA., Qi Y, Nam K, Spong MC, Banerjee A, Sung RJ, Zhang M, Karplus M, Verdine GL, Proc Natl Acad Sci U S A. 2012 Jan 24;109(4):1086-91. Epub 2012 Jan 4. PMID:22219368

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (3sau.pdb1.gz) 103 Kb LPC: Ligand-Protein Contacts for 3SAU CSU: Contacts of Structural Units for 3SAU Structure Factors (711 Kb) Retrieve 3SAU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SAU from S2C, [Save to disk] Re-refined 3sau structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SAU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3SAU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3SAU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3sau_A] [3sau] [3sau_C] [3sau_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3SAU: [Fapy_DNA_glyco] [H2TH ] by SMART

Other resources with information on 3SAU

Community annotation for 3SAU at PDBWiki (http://pdbwiki.org)

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