3SPW	Protein Binding	date	Jul 04, 2011
title	Structure Of Osh4pkes1p In Complex With Phosphatidylinosito Phosphate
authors	V.Delfosse, M.De Saint-Jean, D.Douguet, B.Antonny, G.Drin, W.Bour
compound		source
Molecule: Protein Kes1 Chain: A, B Synonym: Oxysterol-Binding Protein Homolog 4 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c Gene: Kes1, Lpi3c, Osh4, P2614, Ypl145c Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21-De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-4t-3
symmetry	Space Group: P 1 21 1	R_factor 0.228 R_Free 0.270
crystal cell	length a length b length c angle alpha angle beta angle gamma 73.460 54.760 121.860 90.00 91.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	T7M	enzyme
Gene Ontology	Chain Function Process Component A, B intermembrane sterol transfe...
Primary reference	Osh4p exchanges sterols for phosphatidylinositol 4-phosphate between lipid bilayers., de Saint-Jean M, Delfosse V, Douguet D, Chicanne G, Payrastre B, Bourguet W, Antonny B, Drin G, J Cell Biol. 2011 Dec 12;195(6):965-78. PMID:22162133

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk] Biological Unit Coordinates (3spw.pdb1.gz) 68 Kb Biological Unit Coordinates (3spw.pdb2.gz) 62 Kb LPC: Ligand-Protein Contacts for 3SPW CSU: Contacts of Structural Units for 3SPW Structure Factors (233 Kb) Retrieve 3SPW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SPW from S2C, [Save to disk] Re-refined 3spw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SPW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3SPW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3SPW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3spw_B] [3spw] [3spw_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3SPW

Community annotation for 3SPW at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---