3SX0	Transferase	date	Jul 14, 2011
title	Crystal Structure Of Dot1l In Complex With A Brominated Sah
authors	W.Yu, W.Tempel, D.Smil, M.Schapira, Y.Li, M.Vedadi, K.T.Nguyen, A.K.Wernimont, C.H.Arrowsmith, A.M.Edwards, C.Bountra, J.Weigel P.J.Brown, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Histone-Lysine N-Methyltransferase, H3 Lysine-79 Chain: A Fragment: Sequence Database Residues 1-420 Synonym: Dot1-Like Protein, Histone H3-K79 Methyltransferas Hmtase, Lysine N-Methyltransferase 4; Ec: 2.1.1.43 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dot1l, Kiaa1814, Kmt4 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21-V2r-Prare2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28-Mhl
symmetry	Space Group: P 65	R_factor 0.210 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 152.917 152.917 50.964 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.28 Å
ligand	SO4, SX0, UNX BindingDB	enzyme	Transferase E.C.2.1.1.43 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Bromo-deaza-SAH: a potent and selective DOT1L inhibitor., Yu W, Smil D, Li F, Tempel W, Fedorov O, Nguyen KT, Bolshan Y, Al-Awar R, Knapp S, Arrowsmith CH, Vedadi M, Brown PJ, Schapira M, Bioorg Med Chem. 2013 Apr 1;21(7):1787-1794. doi: 10.1016/j.bmc.2013.01.049. Epub, 2013 Jan 30. PMID:23433670

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk] Biological Unit Coordinates (3sx0.pdb1.gz) 110 Kb LPC: Ligand-Protein Contacts for 3SX0 CSU: Contacts of Structural Units for 3SX0 Structure Factors (458 Kb) Retrieve 3SX0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SX0 from S2C, [Save to disk] Re-refined 3sx0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SX0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3SX0

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3SX0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3sx0] [3sx0_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3SX0: [AT_hook ] by SMART

Other resources with information on 3SX0

Community annotation for 3SX0 at PDBWiki (http://pdbwiki.org)

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