3TGM	Oxidoreductase Oxidoreductase Inhibitor	date	Aug 17, 2011
title	X-Ray Crystal Structure Of Human Heme Oxygenase-1 In Complex (1h-Imidazol-1-Yl)-4,4-Diphenyl-2 Butanone
authors	M.N.Rahman, Z.Jia
compound		source
Molecule: Heme Oxygenase 1 Chain: A, B Fragment: Residues 1-233 Synonym: Ho-1 Ec: 1.14.99.3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hmox1, Ho, Ho1 Expression_system: Escherichia Coli Expression_system_taxid: 668369 Expression_system_strain: Dh5-Alpha Expression_system_vector_type: Plasmid Expression_system_plasmid: Delta233-Hho-1
symmetry	Space Group: P 21 21 21	R_factor 0.223 R_Free 0.264
crystal cell	length a length b length c angle alpha angle beta angle gamma 54.610 74.980 115.280 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.85 Å
ligand	3TG, HEM, HEZ	enzyme	Oxidoreductase E.C.1.14.99.3 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	A novel, "double-clamp" binding mode for human heme oxygenase-1 inhibition., Rahman MN, Vlahakis JZ, Vukomanovic D, Lee W, Szarek WA, Nakatsu K, Jia Z, PLoS One. 2012;7(1):e29514. Epub 2012 Jan 19. PMID:22276118

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk] Biological Unit Coordinates (3tgm.pdb1.gz) 37 Kb Biological Unit Coordinates (3tgm.pdb2.gz) 37 Kb LPC: Ligand-Protein Contacts for 3TGM CSU: Contacts of Structural Units for 3TGM Structure Factors (86 Kb) Retrieve 3TGM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TGM from S2C, [Save to disk] Re-refined 3tgm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TGM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TGM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TGM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tgm_B] [3tgm_A] [3tgm] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3TGM

Community annotation for 3TGM at PDBWiki (http://pdbwiki.org)

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