3THM	Immune System	date	Aug 19, 2011
title	Crystal Structure Of Fas Receptor Extracellular Domain In Co Fab Ep6b_b01
authors	S.Zuger, C.Stirnimann, C.Briand, M.G.Grutter
compound		source
Molecule: Fab Ep6b_b01, Light Chain Chain: L Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029 Expression_system_cell: Cho Cells
Molecule: Fab Ep6b_b01, Heavy Chain Chain: H Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029 Expression_system_cell: Cho Cells
Molecule: Tumor Necrosis Factor Receptor Superfamily Member Chain: F Fragment: Extracellular Domain Synonym: Apo-1 Antigen, Apoptosis-Mediating Surface Antigen Faslg Receptor; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Apt1, Fas, Fas1, Tnfrsf6 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 31 2 1	R_factor 0.183 R_Free 0.221
crystal cell	length a length b length c angle alpha angle beta angle gamma 94.510 94.510 139.200 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	EDO, FUC, NAG	enzyme
Gene Ontology	Chain Function Process Component F
Primary reference	A series of Fas receptor agonist antibodies that demonstrate an inverse correlation between affinity and potency., Chodorge M, Zuger S, Stirnimann C, Briand C, Jermutus L, Grutter MG, Minter RR, Cell Death Differ. 2012 Jan 20. doi: 10.1038/cdd.2011.208. PMID:22261618

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (250 Kb) [Save to disk] Biological Unit Coordinates (3thm.pdb1.gz) 243 Kb LPC: Ligand-Protein Contacts for 3THM CSU: Contacts of Structural Units for 3THM Structure Factors (322 Kb) Retrieve 3THM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3THM from S2C, [Save to disk] Re-refined 3thm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3THM in 3D

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Visual 3D analysis of 3THM

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3THM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3thm_H] [3thm_F] [3thm_L] [3thm] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3THM: [IG_like] [IGv] [TNFR ] by SMART

Other resources with information on 3THM

Community annotation for 3THM at PDBWiki (http://pdbwiki.org)

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