3TL2 Oxidoreductase date Aug 29, 2011
title Crystal Structure Of Bacillus Anthracis Str. Ames Malate Deh In Closed Conformation.
authors B.J.Blus, M.Chruszcz, K.L.Tkaczuk, T.Osinski, M.Cymborowski, M.Ku S.Grimshaw, A.Savchenko, W.F.Anderson, W.Minor, Center For Stru Genomics Of Infectious Diseases (Csgid)
compound source
Molecule: Malate Dehydrogenase
Chain: A
Ec: 1.1.1.37
Engineered: Yes
Organism_scientific: Bacillus Anthracis
Organism_common: Anthrax,Anthrax Bacterium
Organism_taxid: 1392
Strain: Ames
Gene: Bas4486, Ba_4837, Gbaa_4837, Mdh
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21-Codonplus(De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: I 2 2 2
R_factor 0.157 R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.181 68.377 142.919 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand EDO, SCN enzyme Oxidoreductase E.C.1.1.1.37 BRENDA
Genes BA, GBAA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (3tl2.pdb1.gz) 396 Kb
  • LPC: Ligand-Protein Contacts for 3TL2
  • CSU: Contacts of Structural Units for 3TL2
  • Structure Factors (871 Kb)
  • Retrieve 3TL2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TL2 from S2C, [Save to disk]
  • Re-refined 3tl2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TL2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TL2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TL2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tl2_A] [3tl2]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3TL2
  • Community annotation for 3TL2 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science