3TOJ	Transcription	date	Sep 05, 2011
title	Structure Of The Spry Domain Of Human Ash2l
authors	Y.Chen, F.Cao, B.Wan, Y.Dou, M.Lei
compound		source
Molecule: Set1ash2 Histone Methyltransferase Complex Subun Chain: A, B Fragment: Ash2l Spry Domain, Unp Residues 370-496, 539-617 Synonym: Ash2-Like Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ash2l, Ash2l1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 31 2 1	R_factor 0.176 R_Free 0.206
crystal cell	length a length b length c angle alpha angle beta angle gamma 115.289 115.289 105.780 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.07 Å
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of the SPRY domain of human Ash2L and its interactions with RbBP5 and DPY30., Chen Y, Cao F, Wan B, Dou Y, Lei M, Cell Res. 2012 Jan 10. doi: 10.1038/cr.2012.9. PMID:22231628

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk] Biological Unit Coordinates (3toj.pdb1.gz) 136 Kb CSU: Contacts of Structural Units for 3TOJ Structure Factors (338 Kb) Retrieve 3TOJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TOJ from S2C, [Save to disk] Re-refined 3toj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TOJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TOJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TOJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3toj] [3toj_B] [3toj_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3TOJ: [SPRY ] by SMART

Other resources with information on 3TOJ

Community annotation for 3TOJ at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---