3TOT Transferase date Sep 06, 2011
title Crystal Structure Of Glutathione Transferase (Target Efi-501 Ralstonia Solanacearum Gmi1000
authors Y.Patskovsky, R.Toro, R.Bhosle, W.D.Zencheck, B.Hillerich, R.D.Se E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, H R.N.Armstrong, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative
compound source
Molecule: Glutathione S-Transferase Protein
Chain: A, B
Ec: 2.5.1.18
Engineered: Yes
 Organism_scientific: Ralstonia Solanacearum
Organism_taxid: 305
Gene: Gstk, Rsc2721
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: P 41 21 2
R_factor 0.172 R_Free 0.204
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.324 76.324 151.624 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.76 Å
ligand ACT enzyme Transferase E.C.2.5.1.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (3tot.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 3TOT
  • CSU: Contacts of Structural Units for 3TOT
  • Structure Factors (333 Kb)
  • Retrieve 3TOT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TOT from S2C, [Save to disk]
  • Re-refined 3tot structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3TOT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3TOT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TOT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tot_B] [3tot] [3tot_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3TOT
  • Community annotation for 3TOT at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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