3TQ7	Protein Binding	date	Sep 09, 2011
title	Eb1ceb3c Heterodimer In Complex With The Cap-Gly Domain Of
authors	C.O.De Groot, M.A.Scharer, G.Capitani, M.O.Steinmetz
compound		source
Molecule: Microtubule-Associated Protein Rpeb Family Membe Chain: A Fragment: Eb1 C-Terminal Domain Synonym: Apc-Binding Protein Eb1, End-Binding Protein 1, Eb Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapre1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
Molecule: Microtubule-Associated Protein Rpeb Family Membe Chain: B Fragment: Eb3 C-Terminal Domain Synonym: Eb1 Protein Family Member 3, Ebf3, End-Binding Pro Eb3, Rp3; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapre3 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdest17
Molecule: Dynactin Subunit 1 Chain: P, Q Fragment: Cap-Gly Domain Of P150glued Synonym: 150 Kda Dynein-Associated Polypeptide, Dap-150, Dp P135, P150-Glued; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dctn1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 1 21 1	R_factor 0.226 R_Free 0.281
crystal cell	length a length b length c angle alpha angle beta angle gamma 41.150 103.560 48.130 90.00 113.64 90.00
method	X-Ray Diffraction	resolution	2.30 Å
Gene Ontology	Chain Function Process Component A B
Primary reference	Interaction of mammalian end binding proteins with CAP-Gly domains of CLIP-170 and p150(glued)., Bjelic S, De Groot CO, Scharer MA, Jaussi R, Bargsten K, Salzmann M, Frey D, Capitani G, Kammerer RA, Steinmetz MO, J Struct Biol. 2012 Jan;177(1):160-7. Epub 2011 Nov 17. PMID:22119847

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk] Biological Unit Coordinates (3tq7.pdb1.gz) 85 Kb CSU: Contacts of Structural Units for 3TQ7 Structure Factors (105 Kb) Retrieve 3TQ7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TQ7 from S2C, [Save to disk] Re-refined 3tq7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TQ7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TQ7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TQ7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tq7_B] [3tq7_Q] [3tq7_A] [3tq7] [3tq7_P] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3TQ7: [CAP_GLY ] by SMART

Other resources with information on 3TQ7

Community annotation for 3TQ7 at PDBWiki (http://pdbwiki.org)

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