3TSR Hydrolase Hydrolase Inhibitor date Sep 13, 2011
title X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed Wi Ribonuclease 1
authors A.Chang, J.E.Lomax, C.A.Bingman, R.T.Raines, G.N.Phillips Jr.
compound source
Molecule: Ribonuclease Pancreatic
Chain: A, B, C, D
Synonym: Rnase 1, Rnase A
Ec: 3.1.27.5
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Strain: C57bl6j
Gene: Rib-1, Rib1, Rnase1, Rns1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b

Molecule: Ribonuclease Inhibitor
Chain: E, F, G, H
Synonym: Ribonucleaseangiogenin Inhibitor 1
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Strain: C57bl6j
Gene: Rnh, Rnh1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 1 21 1
R_factor 0.182 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.396 125.341 123.064 90.00 94.72 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand EDO, PEG enzyme Hydrolase E.C.3.1.27.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B, C, D
  • ribonuclease A activity


  • F, E, H, G
  • ribonuclease inhibitor activ...


  • Primary referenceFunctional Evolution of Ribonuclease Inhibitor: Insights from Birds and Reptiles., Lomax JE, Bianchetti CM, Chang A, Phillips GN Jr, Fox BG, Raines RT, J Mol Biol. 2014 Jun 15. pii: S0022-2836(14)00287-3. doi:, 10.1016/j.jmb.2014.06.007. PMID:24941155
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (378 Kb) [Save to disk]
  • Biological Unit Coordinates (3tsr.pdb1.gz) 99 Kb
  • Biological Unit Coordinates (3tsr.pdb2.gz) 99 Kb
  • Biological Unit Coordinates (3tsr.pdb3.gz) 97 Kb
  • Biological Unit Coordinates (3tsr.pdb4.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 3TSR
  • CSU: Contacts of Structural Units for 3TSR
  • Structure Factors (564 Kb)
  • Retrieve 3TSR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TSR from S2C, [Save to disk]
  • Re-refined 3tsr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TSR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TSR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TSR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tsr_B] [3tsr] [3tsr_H] [3tsr_D] [3tsr_G] [3tsr_F] [3tsr_C] [3tsr_E] [3tsr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3TSR: [LRR] [LRR_RI] [RNAse_Pc ] by SMART
  • Other resources with information on 3TSR
  • Community annotation for 3TSR at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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