3U2Z	Transferase Transferase Activator	date	Oct 04, 2011
title	Activator-Bound Structure Of Human Pyruvate Kinase M2
authors	B.Hong, S.Dimov, W.Tempel, D.Auld, C.Thomas, M.Boxer, J.K.Jianq, A.Skoumbourdis, S.Min, N.Southall, C.H.Arrowsmith, A.M.Edwards, C.Bountra, J.Weigelt, J.Inglese, H.Park, Structural Genomics Co (Sgc)
compound		source
Molecule: Pyruvate Kinase Isozymes M1m2 Chain: A, B, C, D Synonym: Cytosolic Thyroid Hormone-Binding Protein, Cthbp, Interacting Protein 3, Oip-3, Pyruvate Kinase 23, Pyruvate Muscle Isozyme, Thyroid Hormone-Binding Protein 1, Thbp1, T Pk, P58; Ec: 2.7.1.40 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pkm2, Oip3, Pk2, Pk3, Pkm Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a-Lic
symmetry	Space Group: P 1 21 1	R_factor 0.190 R_Free 0.231
crystal cell	length a length b length c angle alpha angle beta angle gamma 80.762 151.163 93.213 90.00 102.94 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	07T, FBP, UNX	enzyme	Transferase E.C.2.7.1.40 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Pyruvate kinase M2 activators promote tetramer formation and suppress tumorigenesis., Anastasiou D, Yu Y, Israelsen WJ, Jiang JK, Boxer MB, Hong BS, Tempel W, Dimov S, Shen M, Jha A, Yang H, Mattaini KR, Metallo CM, Fiske BP, Courtney KD, Malstrom S, Khan TM, Kung C, Skoumbourdis AP, Veith H, Southall N, Walsh MJ, Brimacombe KR, Leister W, Lunt SY, Johnson ZR, Yen KE, Kunii K, Davidson SM, Christofk HR, Austin CP, Inglese J, Harris MH, Asara JM, Stephanopoulos G, Salituro FG, Jin S, Dang L, Auld DS, Park HW, Cantley LC, Thomas CJ, Heiden MG, Nat Chem Biol. 2012 Aug 26. doi: 10.1038/nchembio.1060. PMID:22922757

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (646 Kb) [Save to disk] Biological Unit Coordinates (3u2z.pdb1.gz) 637 Kb LPC: Ligand-Protein Contacts for 3U2Z CSU: Contacts of Structural Units for 3U2Z Structure Factors (1824 Kb) Retrieve 3U2Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3U2Z from S2C, [Save to disk] Re-refined 3u2z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3U2Z in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3U2Z

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3U2Z, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3u2z_C] [3u2z_A] [3u2z_D] [3u2z_B] [3u2z] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3U2Z

Community annotation for 3U2Z at PDBWiki (http://pdbwiki.org)

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