3U3F	Transferase Signaling Protein	date	Oct 05, 2011
title	Structural Basis For The Interaction Of Pyk2 Pat Domain With Ld Motifs
authors	M.Vanarotti, D.J.Miller, C.C.Guibao, J.J.Zheng
compound		source
Molecule: Protein-Tyrosine Kinase 2-Beta Chain: A, B, C, D Fragment: Unp Residues 871-1005 Synonym: Focal Adhesion Kinase 2, Fadk 2, Raftk Ec: 2.7.10.2 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ptk2b, Fak2, Pyk2, Raftk Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28
Molecule: Paxillin Ld2 Peptide Chain: E, F, G, H, I, J Fragment: Unp Residues 261-277 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Synthetic Peptide
symmetry	Space Group: P 21 21 21	R_factor 0.218 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 83.599 83.747 170.545 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.10 Å
ligand		enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structural and mechanistic insights into the interaction between Pyk2 and Paxillin LD motifs., Vanarotti MS, Miller DJ, Guibao CD, Nourse A, Zheng JJ, J Mol Biol. 2014 Aug 28. pii: S0022-2836(14)00457-4. doi:, 10.1016/j.jmb.2014.08.014. PMID:25174335

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk] Biological Unit Coordinates (3u3f.pdb1.gz) 24 Kb Biological Unit Coordinates (3u3f.pdb2.gz) 24 Kb Biological Unit Coordinates (3u3f.pdb3.gz) 21 Kb Biological Unit Coordinates (3u3f.pdb4.gz) 22 Kb CSU: Contacts of Structural Units for 3U3F Structure Factors (298 Kb) Retrieve 3U3F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3U3F from S2C, [Save to disk] Re-refined 3u3f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3U3F in 3D

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Visual 3D analysis of 3U3F

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3U3F, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3u3f] [3u3f_D] [3u3f_J] [3u3f_I] [3u3f_B] [3u3f_G] [3u3f_A] [3u3f_C] [3u3f_F] [3u3f_E] [3u3f_H] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3U3F

Community annotation for 3U3F at PDBWiki (http://pdbwiki.org)

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